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WCMC

Connecting genetic risk to disease endpoints through the human blood plasma proteome

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Locus annotations

Locus 381

Top associations per target

Target cis/​trans Study SNP SNP location Maj/​min allele MAF N βinv seinv Pinv fclog Plog Praw
SIG14 cis Discovery rs17660992 19:52,163,948 G/T 0.35 997 0.319 0.045 2.6×10-12 1.210 1.3×10-12 3×10-13
SIG14 cis Replication rs17660992 19:52,163,948 C/A 0.38 337 0.249 0.062 7.9×10-5 1.190 0.001 1.7×10-4

 

Regional association plots

Sialic acid-binding Ig-like lectin 14 (SIG14)

Download the association data used to generate this plot

 

Boxplots and histograms for top associations

Sialic acid-binding Ig-like lectin 14 (SIG14)

inverse-normalized probe levels log2 transformed probe levels raw probe levels
Discovery study
Replication study

Sialic acid-binding Ig-like lectin 14 (SIG14)

Target (abbrv.) SIG14
Target (full name) Sialic acid-binding Ig-like lectin 14
Somalogic ID (Sequence ID) SL014292 (5125-6_3)
Entrez Gene Symbol SIGLEC14
UniProt ID Q08ET2
UniProt Comment
  • Putative adhesion molecule. Sialic acid-binding paired receptor which may activate associated receptors.
Reactome
  • DAP12 interactions

All locus annotations are based on the sentinel SNP (rs17660992) and 1 proxy variant(s) that is/are in linkage disequilibrium r2 ≥ 0.8. Linkage disequilibrium is based on data from the 1000 Genomes Project, phase 3 version 5, European population and was retrieved using SNiPA's Block Annotation feature.
Download the detailed results of SNiPA's block annotation (PDF)

Linked genes

 

Results from other genome-wide association studies

No associations available.