 |
  |
 |
| Home | Start a new run | Job status | Examples | Documentation | Privacy Statement | Imprint |
server
|
JobID: 1606161612388064*** P1_male ***
LOGFILESIn case of trouble, check out our FAQs!Running METAP SERVER Thu Jun 16 16:13:01 CEST 2016 ID=1606161612388064 /home/metap2/exec:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin /home/metap2/data + echo 'we are here' we are here + pwd /home/metap2/public_html/users/1606161612388064 + hostname metap + uname -a Linux metap 3.13.0-79-generic #123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016 x86_64 x86_64 x86_64 GNU/... + echo 'this is the environment' this is the environment + env RATIOS=n OUTLIER=n MISSING=n DATADIR=/home/metap2/data SHELL=/bin/sh JOBID=P1_male REFERENCE=n PATH=/home/metap2/exec:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin PWD=/home/metap2/public_html/users/1606161612388064 PRIVAT=0 LANG=en_US.UTF-8 SHLVL=1 HOME=/home/metap2 ID=1606161612388064 DEL_METABS=n FORMAT=absoluteIDQ LOGNAME=metap2 EMAIL=unknown USERID=unknown DEVELOPT= _=/usr/bin/env + echo 'this is a first R script that works on the input data' this is a first R script that works on the input data + '[' '' = werner ']' + '[' '' = karsten ']' + '[' '' = gabi ']' + '[' '' = elisabeth ']' + process_metaP_data.R RUNNING /home/metap2/exec/process_metaP_data.R Use of uninitialized value $out0 in substitution (s///) at /home/metap2/exec/readAux.pl line 66. Use of uninitialized value $out0 in substitution (s///) at /home/metap2/exec/readAux.pl line 67. Use of uninitialized value in transliteration (tr///) at /home/metap2/exec/readAux.pl line 68. Use of uninitialized value $out0 in concatenation (.) or string at /home/metap2/exec/readAux.pl line... Use of uninitialized value $max_length in numeric lt (<) at /home/metap2/exec/readAux.pl line 71. -rw-rw-r-- 1 metap2 metap2 59349 Jun 16 16:15 .R.Rout adding: batchBoxplot.pdf (deflated 89%) adding: sample_description.csv (deflated 70%) adding: summary.csv (deflated 55%) adding: colsToMark.x.csv (deflated 83%) adding: phenotypes.csv (deflated 78%) adding: data_all.csv (deflated 65%) adding: processing_log.txt (deflated 72%) adding: options (deflated 40%) adding: colsToMark.csv (deflated 30%) adding: phenotypes_numeric.csv (deflated 78%) adding: cv.pdf (deflated 43%) adding: bonferroni.csv (deflated 20%) adding: rowsToMark.csv (deflated 72%) adding: metabNamesMapping.csv (deflated 79%) adding: out_params.txt (stored 0%) adding: input (deflated 73%) adding: data.csv (deflated 65%) adding: phenotypes.txt (deflated 80%) adding: pValuesForAllMetabolites__Batch.key.csv (deflated 76%) adding: phenotypes_for_QC.csv (deflated 86%) adding: histograms.pdf (deflated 89%) adding: barplots/PC.aa.C32.3_barplot.png (deflated 19%) adding: barplots/C16_barplot_AGE.png (deflated 14%) adding: barplots/PC.aa.C40.1_barplot_Genotype.png (deflated 23%) adding: barplots/PC.aa.C40.4_barplot.png (stored 0%) adding: barplots/C6..C4.1.DC._barplot_Radiation.png (deflated 19%) adding: barplots/Spermine_barplot_Radiation.png (deflated 30%) adding: barplots/C2_barplot_AGE.png (deflated 22%) adding: barplots/C7.DC_barplot_Radiation.png (deflated 17%) adding: barplots/C14.1.OH_barplot.png (deflated 18%) adding: barplots/PC.aa.C32.3_barplot_Genotype.png (deflated 16%) adding: barplots/C16_barplot_Radiation.png (deflated 15%) adding: barplots/C7.DC_barplot_AGE.png (deflated 16%) adding: barplots/Carnosine_barplot_AGE.png (deflated 15%) adding: barplots/C16.1.OH_barplot.map (deflated 82%) adding: barplots/lysoPC.a.C20.4_barplot_Radiation.png (deflated 22%) adding: barplots/PC.aa.C34.4_barplot.png (deflated 40%) adding: barplots/Glu_barplot_Radiation.png (deflated 22%) adding: barplots/C14_barplot_Genotype.png (deflated 19%) adding: barplots/lysoPC.a.C17.0_barplot_Radiation.png (deflated 25%) adding: barplots/Asp_barplot_AGE.png (deflated 23%) adding: barplots/total.DMA_barplot_AGE.png (deflated 28%) adding: barplots/C3.DC..C4.OH._barplot_Radiation.png (deflated 15%) adding: barplots/Met.SO_barplot_Genotype.png (deflated 32%) adding: barplots/Kynurenine_barplot_Genotype.png (deflated 16%) adding: barplots/Trp_barplot_AGE.png (deflated 26%) adding: barplots/lysoPC.a.C16.1_barplot_Radiation.png (deflated 23%) adding: barplots/Kynurenine_barplot_Radiation.png (deflated 15%) adding: barplots/lysoPC.a.C26.1_barplot_Radiation.png (deflated 17%) adding: barplots/C12.DC_barplot.map (deflated 82%) adding: barplots/lysoPC.a.C14.0_barplot_Genotype.png (deflated 35%) adding: barplots/C14.1.OH_barplot.map (deflated 82%) adding: barplots/C5.1_barplot_AGE.png (deflated 19%) adding: barplots/C6..C4.1.DC._barplot_Genotype.png (deflated 21%) adding: barplots/C3_barplot_AGE.png (deflated 29%) adding: barplots/C0_barplot_AGE.png (deflated 22%) adding: barplots/C6..C4.1.DC._barplot_AGE.png (deflated 17%) adding: barplots/c4.OH.Pro_barplot_Radiation.png (deflated 22%) adding: barplots/PC.aa.C38.1_barplot.png (deflated 37%) adding: barplots/C16.2.OH_barplot_Genotype.png (deflated 19%) adding: barplots/lysoPC.a.C26.0_barplot.map (deflated 83%) adding: barplots/Trp_barplot.map (deflated 84%) adding: barplots/C14.2.OH_barplot_AGE.png (deflated 15%) adding: barplots/C12.DC_barplot.png (deflated 24%) adding: barplots/C6.1_barplot_Radiation.png (deflated 16%) adding: barplots/DOPA_barplot_Genotype.png (deflated 32%) adding: barplots/C4_barplot.png (deflated 39%) adding: barplots/C18.1.OH_barplot.map (deflated 82%) adding: barplots/C5.M.DC_barplot.png (deflated 22%) adding: barplots/C12_barplot_Genotype.png (deflated 18%) adding: barplots/C18.1.OH_barplot_Radiation.png (deflated 17%) adding: barplots/lysoPC.a.C20.4_barplot.map (deflated 84%) adding: barplots/DOPA_barplot.map (deflated 84%) adding: barplots/Lys_barplot_AGE.png (deflated 22%) adding: barplots/Lys_barplot.map (deflated 84%) adding: barplots/C16.OH_barplot.map (deflated 82%) adding: barplots/PC.aa.C40.1_barplot_Radiation.png (deflated 20%) adding: barplots/PC.aa.C24.0_barplot_AGE.png (deflated 28%) adding: barplots/C10.2_barplot_Genotype.png (deflated 18%) adding: barplots/Spermine_barplot.png (deflated 40%) adding: barplots/lysoPC.a.C28.0_barplot_Radiation.png (deflated 29%) adding: barplots/Nitro.Tyr_barplot.png (deflated 30%) adding: barplots/t4.OH.Pro_barplot_Radiation.png (deflated 30%) adding: barplots/DOPA_barplot.png (deflated 38%) adding: barplots/C4_barplot_Genotype.png (deflated 33%) adding: barplots/PC.aa.C38.0_barplot_AGE.png (deflated 19%) adding: barplots/lysoPC.a.C16.1_barplot_AGE.png (deflated 24%) adding: barplots/C4.1_barplot_AGE.png (deflated 15%) adding: barplots/C18_barplot_Genotype.png (deflated 19%) adding: barplots/Glu_barplot_AGE.png (deflated 22%) adding: barplots/PC.aa.C32.3_barplot_Radiation.png (deflated 16%) adding: barplots/PC.aa.C40.2_barplot_AGE.png (deflated 30%) adding: barplots/C16.2_barplot.png (deflated 19%) adding: barplots/C4_barplot.map (deflated 83%) adding: barplots/C10_barplot.png (deflated 20%) adding: barplots/C3.OH_barplot.map (deflated 82%) adding: barplots/C18.2_barplot.map (deflated 82%) adding: barplots/PC.aa.C36.0_barplot_Radiation.png (deflated 25%) adding: barplots/C14.2_barplot_Radiation.png (deflated 16%) adding: barplots/Histamine_barplot_AGE.png (deflated 19%) adding: barplots/ADMA_barplot_AGE.png (deflated 16%) adding: barplots/lysoPC.a.C20.3_barplot_Genotype.png (deflated 32%) adding: barplots/C8_barplot_Genotype.png (deflated 18%) adding: barplots/C4.1_barplot_Genotype.png (deflated 17%) adding: barplots/C12.1_barplot.map (deflated 82%) adding: barplots/C3.1_barplot_Genotype.png (deflated 18%) adding: barplots/C10.1_barplot.png (deflated 20%) adding: barplots/C10_barplot_AGE.png (deflated 18%) adding: barplots/PC.aa.C40.2_barplot_Genotype.png (deflated 42%) adding: barplots/PC.aa.C36.5_barplot_Radiation.png (deflated 27%) adding: barplots/C18.1_barplot.map (deflated 82%) adding: barplots/C18.2_barplot_AGE.png (deflated 14%) adding: barplots/Met.SO_barplot.png (deflated 40%) adding: barplots/DOPA_barplot_Radiation.png (deflated 26%) adding: barplots/C5.OH..C3.DC.M._barplot_Genotype.png (deflated 15%) adding: barplots/C3.DC..C4.OH._barplot.map (deflated 82%) adding: barplots/lysoPC.a.C20.3_barplot_AGE.png (deflated 23%) adding: barplots/C5.M.DC_barplot_Genotype.png (deflated 17%) adding: barplots/PC.aa.C30.0_barplot_Genotype.png (deflated 32%) adding: barplots/PC.aa.C32.1_barplot.map (deflated 83%) adding: barplots/C10_barplot_Radiation.png (deflated 17%) adding: barplots/lysoPC.a.C26.0_barplot_Genotype.png (deflated 35%) adding: barplots/lysoPC.a.C20.3_barplot.map (deflated 83%) adding: barplots/C3_barplot.map (deflated 83%) adding: barplots/PC.aa.C36.5_barplot_Genotype.png (deflated 34%) adding: barplots/C3.DC..C4.OH._barplot.png (deflated 19%) adding: barplots/c4.OH.Pro_barplot_AGE.png (deflated 22%) adding: barplots/C7.DC_barplot.map (deflated 82%) adding: barplots/PC.aa.C30.0_barplot.map (deflated 83%) adding: barplots/PEA_barplot.png (deflated 31%) adding: barplots/alpha.AAA_barplot.png (deflated 38%) adding: barplots/PC.aa.C36.0_barplot.png (deflated 34%) adding: barplots/Met_barplot.png (deflated 30%) adding: barplots/C14.1_barplot.png (deflated 23%) adding: barplots/C12.1_barplot.png (deflated 17%) adding: barplots/C6..C4.1.DC._barplot.png (deflated 22%) adding: barplots/PC.aa.C32.1_barplot.png (deflated 36%) adding: barplots/Trp_barplot_Genotype.png (deflated 33%) adding: barplots/Taurine_barplot_Genotype.png (deflated 25%) adding: barplots/C14.2.OH_barplot_Radiation.png (deflated 18%) adding: barplots/C14.2_barplot.png (deflated 22%) adding: barplots/SDMA_barplot_AGE.png (deflated 22%) adding: barplots/PC.aa.C34.3_barplot_Radiation.png (deflated 22%) adding: barplots/lysoPC.a.C28.1_barplot_Radiation.png (deflated 20%) adding: barplots/C16.OH_barplot_Radiation.png (deflated 17%) adding: barplots/Met.SO_barplot_Radiation.png (deflated 29%) adding: barplots/C7.DC_barplot_Genotype.png (deflated 19%) adding: barplots/PC.aa.C32.2_barplot.png (deflated 50%) adding: barplots/C6.1_barplot.png (deflated 22%) adding: barplots/C18_barplot_AGE.png (deflated 16%) adding: barplots/Putrescine_barplot.map (deflated 83%) adding: barplots/C9_barplot_AGE.png (deflated 15%) adding: barplots/PEA_barplot_AGE.png (deflated 21%) adding: barplots/PC.aa.C38.3_barplot_AGE.png (deflated 24%) adding: barplots/lysoPC.a.C26.1_barplot.png (deflated 22%) adding: barplots/PC.aa.C32.1_barplot_Radiation.png (deflated 24%) adding: barplots/c4.OH.Pro_barplot.map (deflated 84%) adding: barplots/C12_barplot_Radiation.png (deflated 17%) adding: barplots/PC.aa.C36.6_barplot.map (deflated 84%) adding: barplots/lysoPC.a.C28.1_barplot.png (deflated 27%) adding: barplots/C5.1.DC_barplot_Radiation.png (deflated 17%) adding: barplots/C16.2.OH_barplot.map (deflated 82%) adding: barplots/C6.1_barplot_Genotype.png (deflated 18%) adding: barplots/lysoPC.a.C24.0_barplot.map (deflated 83%) adding: barplots/PC.aa.C38.6_barplot.png (deflated 30%) adding: barplots/C16.1.OH_barplot_Radiation.png (deflated 16%) adding: barplots/C14.1_barplot_Radiation.png (deflated 18%) adding: barplots/C5_barplot.png (deflated 22%) adding: barplots/PC.aa.C38.6_barplot_Genotype.png (deflated 25%) adding: barplots/c4.OH.Pro_barplot.png (deflated 30%) adding: barplots/C16.2.OH_barplot_AGE.png (deflated 16%) adding: barplots/C18_barplot.map (deflated 82%) adding: barplots/SDMA_barplot_Radiation.png (deflated 22%) adding: barplots/PC.aa.C30.2_barplot.map (deflated 82%) adding: barplots/PC.aa.C40.3_barplot_Genotype.png (deflated 36%) adding: barplots/C14_barplot_AGE.png (deflated 15%) adding: barplots/Putrescine_barplot_Radiation.png (deflated 20%) adding: barplots/Ac.Orn_barplot.map (deflated 84%) adding: barplots/PC.aa.C34.3_barplot_Genotype.png (deflated 25%) adding: barplots/lysoPC.a.C14.0_barplot_Radiation.png (deflated 29%) adding: barplots/C10.2_barplot.map (deflated 82%) adding: barplots/Spermidine_barplot_Genotype.png (deflated 36%) adding: barplots/C16.1_barplot.map (deflated 82%) adding: barplots/PC.aa.C40.3_barplot.png (deflated 48%) adding: barplots/PC.aa.C28.1_barplot.map (deflated 82%) adding: barplots/C16.1.OH_barplot.png (deflated 20%) adding: barplots/C14.2.OH_barplot_Genotype.png (deflated 19%) adding: barplots/PC.aa.C36.0_barplot_AGE.png (deflated 24%) adding: barplots/Dopamine_barplot.png (deflated 30%) adding: barplots/C5.DC..C6.OH._barplot.map (deflated 82%) adding: barplots/Serotonin_barplot_Radiation.png (deflated 19%) adding: barplots/C16.2_barplot_Radiation.png (deflated 14%) adding: barplots/C3.OH_barplot_AGE.png (deflated 16%) adding: barplots/Creatinine_barplot.png (deflated 36%) adding: barplots/C3.1_barplot_AGE.png (deflated 15%) adding: barplots/PC.aa.C34.3_barplot.map (deflated 84%) adding: barplots/PC.aa.C40.3_barplot_Radiation.png (deflated 29%) adding: barplots/C14.1.OH_barplot_Genotype.png (deflated 15%) adding: barplots/Nitro.Tyr_barplot_AGE.png (deflated 22%) adding: barplots/Kynurenine_barplot.png (deflated 17%) adding: barplots/PC.aa.C40.1_barplot.png (deflated 25%) adding: barplots/Met_barplot_Radiation.png (deflated 22%) adding: barplots/Dopamine_barplot_Genotype.png (deflated 25%) adding: barplots/Lys_barplot.png (deflated 30%) adding: barplots/total.DMA_barplot_Genotype.png (deflated 31%) adding: barplots/PC.aa.C36.0_barplot.map (deflated 84%) adding: barplots/C16.OH_barplot_AGE.png (deflated 17%) adding: barplots/lysoPC.a.C18.1_barplot_Genotype.png (deflated 25%) adding: barplots/PC.aa.C32.3_barplot.map (deflated 82%) adding: barplots/C14.2.OH_barplot.png (deflated 20%) adding: barplots/lysoPC.a.C14.0_barplot.png (deflated 38%) adding: barplots/C7.DC_barplot.png (deflated 19%) adding: barplots/PC.aa.C26.0_barplot.png (deflated 39%) adding: barplots/t4.OH.Pro_barplot.png (deflated 38%) adding: barplots/Taurine_barplot_Radiation.png (deflated 22%) adding: barplots/Kynurenine_barplot.map (deflated 82%) adding: barplots/C5.1.DC_barplot.map (deflated 82%) adding: barplots/C10.1_barplot_AGE.png (deflated 16%) adding: barplots/C5.1_barplot.png (deflated 23%) adding: barplots/PC.aa.C26.0_barplot_Radiation.png (deflated 23%) adding: barplots/C5.OH..C3.DC.M._barplot.png (deflated 21%) adding: barplots/lysoPC.a.C20.4_barplot_Genotype.png (deflated 25%) adding: barplots/C18.2_barplot_Genotype.png (deflated 17%) adding: barplots/PC.aa.C26.0_barplot.map (deflated 83%) adding: barplots/lysoPC.a.C20.3_barplot.png (deflated 37%) adding: barplots/Spermidine_barplot.map (deflated 83%) adding: barplots/Cit_barplot_Genotype.png (deflated 25%) adding: barplots/PC.aa.C26.0_barplot_AGE.png (deflated 26%) adding: barplots/C12.1_barplot_AGE.png (deflated 13%) adding: barplots/SDMA_barplot_Genotype.png (deflated 25%) adding: barplots/C3.DC..C4.OH._barplot_AGE.png (deflated 15%) adding: barplots/Histamine_barplot_Genotype.png (deflated 25%) adding: barplots/C14.1_barplot_Genotype.png (deflated 21%) adding: barplots/C9_barplot.map (deflated 82%) adding: barplots/Putrescine_barplot_Genotype.png (deflated 30%) adding: barplots/C18_barplot_Radiation.png (deflated 16%) adding: barplots/Glu_barplot.png (deflated 30%) adding: barplots/C18.1_barplot.png (deflated 28%) adding: barplots/PC.aa.C36.6_barplot_Radiation.png (deflated 30%) adding: barplots/C16.OH_barplot.png (deflated 21%) adding: barplots/C14.1.OH_barplot_Radiation.png (deflated 13%) adding: barplots/C16.1_barplot_Genotype.png (deflated 17%) adding: barplots/C5.1_barplot_Radiation.png (deflated 16%) adding: barplots/C16.2.OH_barplot_Radiation.png (deflated 15%) adding: barplots/Glu_barplot.map (deflated 84%) adding: barplots/C2_barplot.map (deflated 84%) adding: barplots/C16.1.OH_barplot_AGE.png (deflated 16%) adding: barplots/C3.1_barplot_Radiation.png (deflated 16%) adding: barplots/C12.DC_barplot_Radiation.png (deflated 16%) adding: barplots/PC.aa.C38.6_barplot.map (deflated 84%) adding: barplots/Cit_barplot_Radiation.png (deflated 22%) adding: barplots/PC.aa.C38.1_barplot_Genotype.png (deflated 28%) adding: barplots/lysoPC.a.C14.0_barplot.map (deflated 84%) adding: barplots/C12.1_barplot_Radiation.png (deflated 14%) adding: barplots/PC.aa.C40.2_barplot.png (deflated 49%) adding: barplots/C14.2.OH_barplot.map (deflated 82%) adding: barplots/Carnosine_barplot.map (deflated 82%) adding: barplots/C0_barplot_Radiation.png (deflated 22%) adding: barplots/PC.aa.C32.2_barplot_AGE.png (deflated 32%) adding: barplots/C5_barplot.map (deflated 82%) adding: barplots/PC.aa.C32.3_barplot_AGE.png (deflated 15%) adding: barplots/C18_barplot.png (deflated 21%) adding: barplots/total.DMA_barplot.map (deflated 84%) adding: barplots/SDMA_barplot.map (deflated 84%) adding: barplots/Histamine_barplot.map (deflated 83%) adding: barplots/lysoPC.a.C17.0_barplot.png (deflated 34%) adding: barplots/C14.2_barplot_Genotype.png (deflated 16%) adding: barplots/C18.1.OH_barplot.png (deflated 20%) adding: barplots/C5.OH..C3.DC.M._barplot_AGE.png (deflated 14%) adding: barplots/lysoPC.a.C26.1_barplot_Genotype.png (deflated 22%) adding: barplots/C5_barplot_Genotype.png (deflated 18%) adding: barplots/lysoPC.a.C24.0_barplot_Radiation.png (deflated 25%) adding: barplots/C8_barplot.map (deflated 82%) adding: barplots/t4.OH.Pro_barplot_AGE.png (deflated 29%) adding: barplots/C8_barplot_AGE.png (deflated 17%) adding: barplots/C2_barplot_Radiation.png (deflated 22%) adding: barplots/Nitro.Tyr_barplot_Radiation.png (deflated 22%) adding: barplots/lysoPC.a.C20.3_barplot_Radiation.png (deflated 23%) adding: barplots/DOPA_barplot_AGE.png (deflated 25%) adding: barplots/PC.aa.C30.2_barplot_Genotype.png (deflated 15%) adding: barplots/Trp_barplot.png (deflated 35%) adding: barplots/C14_barplot_Radiation.png (deflated 16%) adding: barplots/C16_barplot_Genotype.png (deflated 16%) adding: barplots/PC.aa.C32.2_barplot_Radiation.png (deflated 34%) adding: barplots/Serotonin_barplot_Genotype.png (deflated 19%) adding: barplots/C3.OH_barplot_Genotype.png (deflated 18%) adding: barplots/Histamine_barplot.png (deflated 28%) adding: barplots/C14.1_barplot.map (deflated 82%) adding: barplots/Creatinine_barplot.map (deflated 83%) adding: barplots/PC.aa.C38.1_barplot.map (deflated 83%) adding: barplots/PC.aa.C38.0_barplot_Genotype.png (deflated 24%) adding: barplots/Asp_barplot_Genotype.png (deflated 25%) adding: barplots/PC.aa.C32.1_barplot_Genotype.png (deflated 29%) adding: barplots/alpha.AAA_barplot_Radiation.png (deflated 28%) adding: barplots/C6.1_barplot_AGE.png (deflated 16%) adding: barplots/Serotonin_barplot.png (deflated 24%) adding: barplots/C18.2_barplot_Radiation.png (deflated 15%) adding: barplots/PC.aa.C32.0_barplot_Genotype.png (deflated 25%) adding: barplots/Met_barplot_Genotype.png (deflated 25%) adding: barplots/lysoPC.a.C24.0_barplot_AGE.png (deflated 25%) adding: barplots/PC.aa.C36.6_barplot_AGE.png (deflated 30%) adding: barplots/C14.2_barplot.map (deflated 82%) adding: barplots/C3.DC..C4.OH._barplot_Genotype.png (deflated 17%) adding: barplots/PC.aa.C38.1_barplot_Radiation.png (deflated 26%) adding: barplots/C12_barplot.png (deflated 21%) adding: barplots/C6.1_barplot.map (deflated 82%) adding: barplots/PC.aa.C30.0_barplot.png (deflated 36%) adding: barplots/C5_barplot_AGE.png (deflated 18%) adding: barplots/C14.2_barplot_AGE.png (deflated 14%) adding: barplots/C14_barplot.png (deflated 22%) adding: barplots/PC.aa.C36.6_barplot.png (deflated 40%) adding: barplots/PC.aa.C34.3_barplot.png (deflated 30%) adding: barplots/C0_barplot.png (deflated 30%) adding: barplots/PC.aa.C38.6_barplot_Radiation.png (deflated 22%) adding: barplots/C12.DC_barplot_Genotype.png (deflated 21%) adding: barplots/PC.aa.C38.3_barplot.png (deflated 34%) adding: barplots/Spermine_barplot_AGE.png (deflated 30%) adding: barplots/C5.M.DC_barplot_Radiation.png (deflated 15%) adding: barplots/lysoPC.a.C16.1_barplot.png (deflated 32%) adding: barplots/C14.1.OH_barplot_AGE.png (deflated 13%) adding: barplots/PC.aa.C32.0_barplot_Radiation.png (deflated 22%) adding: barplots/Nitro.Tyr_barplot_Genotype.png (deflated 25%) adding: barplots/Carnosine_barplot_Radiation.png (deflated 16%) adding: barplots/PC.aa.C32.2_barplot.map (deflated 83%) adding: barplots/lysoPC.a.C14.0_barplot_AGE.png (deflated 29%) adding: barplots/PC.aa.C34.3_barplot_AGE.png (deflated 22%) adding: barplots/PC.aa.C34.4_barplot_AGE.png (deflated 27%) adding: barplots/alpha.AAA_barplot_Genotype.png (deflated 31%) adding: barplots/C18.1.OH_barplot_AGE.png (deflated 15%) adding: barplots/lysoPC.a.C17.0_barplot.map (deflated 83%) adding: barplots/Taurine_barplot.png (deflated 30%) adding: barplots/Putrescine_barplot_AGE.png (deflated 20%) adding: barplots/C4.1_barplot_Radiation.png (deflated 16%) adding: barplots/C3_barplot.png (deflated 38%) adding: barplots/C12.1_barplot_Genotype.png (deflated 15%) adding: barplots/lysoPC.a.C24.0_barplot.png (deflated 35%) adding: barplots/PC.aa.C38.0_barplot.png (deflated 30%) adding: barplots/PC.aa.C30.0_barplot_Radiation.png (deflated 28%) adding: barplots/Lys_barplot_Genotype.png (deflated 25%) adding: barplots/Cit_barplot.png (deflated 30%) adding: barplots/Ac.Orn_barplot_Radiation.png (deflated 27%) adding: barplots/Ac.Orn_barplot_AGE.png (deflated 29%) adding: barplots/C10.2_barplot_Radiation.png (deflated 17%) adding: barplots/ADMA_barplot.png (deflated 18%) adding: barplots/C5.1.DC_barplot.png (deflated 21%) adding: barplots/PC.aa.C40.2_barplot.map (deflated 83%) adding: barplots/C10.2_barplot_AGE.png (deflated 17%) adding: barplots/Nitro.Tyr_barplot.map (deflated 84%) adding: barplots/PC.aa.C30.2_barplot_Radiation.png (deflated 15%) adding: barplots/PC.aa.C38.0_barplot.map (deflated 84%) adding: barplots/Dopamine_barplot.map (deflated 84%) adding: barplots/C5_barplot_Radiation.png (deflated 18%) adding: barplots/PC.aa.C24.0_barplot.png (deflated 39%) adding: barplots/C16.1.OH_barplot_Genotype.png (deflated 17%) adding: barplots/C5.OH..C3.DC.M._barplot.map (deflated 82%) adding: barplots/C18.1_barplot_AGE.png (deflated 19%) adding: barplots/C12_barplot.map (deflated 82%) adding: barplots/Glu_barplot_Genotype.png (deflated 25%) adding: barplots/Dopamine_barplot_AGE.png (deflated 22%) adding: barplots/C16.1_barplot_Radiation.png (deflated 17%) adding: barplots/PC.aa.C28.1_barplot_Radiation.png (deflated 14%) adding: barplots/lysoPC.a.C26.0_barplot_AGE.png (deflated 30%) adding: barplots/PC.aa.C28.1_barplot_Genotype.png (deflated 17%) adding: barplots/PC.aa.C34.4_barplot.map (deflated 84%) adding: barplots/PC.aa.C38.3_barplot_Genotype.png (deflated 29%) adding: barplots/total.DMA_barplot_Radiation.png (deflated 29%) adding: barplots/Dopamine_barplot_Radiation.png (deflated 22%) adding: barplots/PC.aa.C34.4_barplot_Radiation.png (deflated 27%) adding: barplots/lysoPC.a.C24.0_barplot_Genotype.png (deflated 28%) adding: barplots/Ac.Orn_barplot_Genotype.png (deflated 35%) adding: barplots/C10.1_barplot.map (deflated 82%) adding: barplots/lysoPC.a.C18.1_barplot_AGE.png (deflated 22%) adding: barplots/C12.DC_barplot_AGE.png (deflated 16%) adding: barplots/Met.SO_barplot.map (deflated 83%) adding: barplots/C16_barplot.png (deflated 18%) adding: barplots/C10_barplot_Genotype.png (deflated 19%) adding: barplots/C4.1_barplot.png (deflated 20%) adding: barplots/lysoPC.a.C28.1_barplot_Genotype.png (deflated 25%) adding: barplots/t4.OH.Pro_barplot_Genotype.png (deflated 35%) adding: barplots/PEA_barplot_Genotype.png (deflated 28%) adding: barplots/lysoPC.a.C28.0_barplot.png (deflated 41%) adding: barplots/C10.2_barplot.png (deflated 19%) adding: barplots/PC.aa.C34.4_barplot_Genotype.png (deflated 31%) adding: barplots/C3_barplot_Genotype.png (deflated 33%) adding: barplots/C3.1_barplot.png (deflated 21%) adding: barplots/PC.aa.C32.1_barplot_AGE.png (deflated 24%) adding: barplots/Serotonin_barplot_AGE.png (deflated 17%) adding: barplots/PC.aa.C26.0_barplot_Genotype.png (deflated 28%) adding: barplots/C16.2_barplot_Genotype.png (deflated 17%) adding: barplots/t4.OH.Pro_barplot.map (deflated 84%) adding: barplots/C2_barplot.png (deflated 30%) adding: barplots/PC.aa.C40.1_barplot_AGE.png (deflated 20%) adding: barplots/lysoPC.a.C16.1_barplot.map (deflated 83%) adding: barplots/PC.aa.C38.1_barplot_AGE.png (deflated 25%) adding: barplots/ADMA_barplot_Radiation.png (deflated 16%) adding: barplots/PC.aa.C40.3_barplot_AGE.png (deflated 33%) adding: barplots/lysoPC.a.C26.1_barplot_AGE.png (deflated 17%) adding: barplots/Putrescine_barplot.png (deflated 35%) adding: barplots/PC.aa.C30.2_barplot.png (deflated 17%) adding: barplots/PC.aa.C28.1_barplot.png (deflated 21%) adding: barplots/C5.DC..C6.OH._barplot.png (deflated 17%) adding: barplots/C16.OH_barplot_Genotype.png (deflated 16%) adding: barplots/C16.2_barplot_AGE.png (deflated 16%) adding: barplots/Spermine_barplot_Genotype.png (deflated 33%) adding: barplots/C9_barplot.png (deflated 19%) adding: barplots/C18.2_barplot.png (deflated 19%) adding: barplots/Met.SO_barplot_AGE.png (deflated 29%) adding: barplots/ADMA_barplot_Genotype.png (deflated 16%) adding: barplots/lysoPC.a.C16.1_barplot_Genotype.png (deflated 28%) adding: barplots/C5.1.DC_barplot_Genotype.png (deflated 19%) adding: barplots/C9_barplot_Genotype.png (deflated 18%) adding: barplots/PC.aa.C36.5_barplot.map (deflated 83%) adding: barplots/SDMA_barplot.png (deflated 30%) adding: barplots/c4.OH.Pro_barplot_Genotype.png (deflated 25%) adding: barplots/lysoPC.a.C17.0_barplot_Genotype.png (deflated 27%) adding: barplots/Creatinine_barplot_Radiation.png (deflated 28%) adding: barplots/lysoPC.a.C26.0_barplot.png (deflated 41%) adding: barplots/lysoPC.a.C18.1_barplot_Radiation.png (deflated 22%) adding: barplots/Cit_barplot.map (deflated 84%) adding: barplots/PC.aa.C38.0_barplot_Radiation.png (deflated 20%) adding: barplots/Trp_barplot_Radiation.png (deflated 27%) adding: barplots/PC.aa.C36.5_barplot_AGE.png (deflated 27%) adding: barplots/C18.1_barplot_Radiation.png (deflated 23%) adding: barplots/Creatinine_barplot_Genotype.png (deflated 30%) adding: barplots/Taurine_barplot.map (deflated 84%) adding: barplots/lysoPC.a.C28.0_barplot_Genotype.png (deflated 35%) adding: barplots/PC.aa.C40.1_barplot.map (deflated 84%) adding: barplots/PC.aa.C32.0_barplot_AGE.png (deflated 22%) adding: barplots/Spermidine_barplot_AGE.png (deflated 28%) adding: barplots/C16.2.OH_barplot.png (deflated 22%) adding: barplots/PC.aa.C38.3_barplot.map (deflated 84%) adding: barplots/lysoPC.a.C28.1_barplot.map (deflated 83%) adding: barplots/Kynurenine_barplot_AGE.png (deflated 15%) adding: barplots/C10.1_barplot_Genotype.png (deflated 17%) adding: barplots/C8_barplot.png (deflated 21%) adding: barplots/C0_barplot_Genotype.png (deflated 25%) adding: barplots/PC.aa.C30.0_barplot_AGE.png (deflated 27%) adding: barplots/C4_barplot_Radiation.png (deflated 24%) adding: barplots/C3.1_barplot.map (deflated 82%) adding: barplots/C5.DC..C6.OH._barplot_Genotype.png (deflated 15%) adding: barplots/C5.1_barplot.map (deflated 82%) adding: barplots/C5.OH..C3.DC.M._barplot_Radiation.png (deflated 15%) adding: barplots/lysoPC.a.C26.0_barplot_Radiation.png (deflated 28%) adding: barplots/Cit_barplot_AGE.png (deflated 22%) adding: barplots/Asp_barplot_Radiation.png (deflated 22%) adding: barplots/C4.1_barplot.map (deflated 82%) adding: barplots/Creatinine_barplot_AGE.png (deflated 27%) adding: barplots/Met_barplot_AGE.png (deflated 22%) adding: barplots/Serotonin_barplot.map (deflated 82%) adding: barplots/PC.aa.C30.2_barplot_AGE.png (deflated 15%) adding: barplots/lysoPC.a.C28.0_barplot.map (deflated 83%) adding: barplots/Spermine_barplot.map (deflated 84%) adding: barplots/C9_barplot_Radiation.png (deflated 15%) adding: barplots/ADMA_barplot.map (deflated 82%) adding: barplots/C18.1_barplot_Genotype.png (deflated 25%) adding: barplots/lysoPC.a.C18.1_barplot.png (deflated 30%) adding: barplots/PC.aa.C40.2_barplot_Radiation.png (deflated 31%) adding: barplots/PC.aa.C24.0_barplot.map (deflated 84%) adding: barplots/Histamine_barplot_Radiation.png (deflated 19%) adding: barplots/C0_barplot.map (deflated 84%) adding: barplots/PC.aa.C28.1_barplot_AGE.png (deflated 16%) adding: barplots/C5.DC..C6.OH._barplot_AGE.png (deflated 14%) adding: barplots/C10.1_barplot_Radiation.png (deflated 16%) adding: barplots/PC.aa.C36.6_barplot_Genotype.png (deflated 32%) adding: barplots/C5.M.DC_barplot_AGE.png (deflated 15%) adding: barplots/C14.1_barplot_AGE.png (deflated 17%) adding: barplots/PC.aa.C24.0_barplot_Genotype.png (deflated 33%) adding: barplots/Spermidine_barplot.png (deflated 40%) adding: barplots/PC.aa.C32.2_barplot_Genotype.png (deflated 40%) adding: barplots/total.DMA_barplot.png (deflated 37%) adding: barplots/PC.aa.C38.3_barplot_Radiation.png (deflated 24%) adding: barplots/lysoPC.a.C28.1_barplot_AGE.png (deflated 20%) adding: barplots/Carnosine_barplot.png (deflated 22%) adding: barplots/lysoPC.a.C20.4_barplot_AGE.png (deflated 22%) adding: barplots/C2_barplot_Genotype.png (deflated 25%) adding: barplots/Ac.Orn_barplot.png (deflated 38%) adding: barplots/C4_barplot_AGE.png (deflated 26%) adding: barplots/lysoPC.a.C20.4_barplot.png (deflated 30%) adding: barplots/C6..C4.1.DC._barplot.map (deflated 82%) adding: barplots/Taurine_barplot_AGE.png (deflated 22%) adding: barplots/C5.1.DC_barplot_AGE.png (deflated 17%) adding: barplots/lysoPC.a.C28.0_barplot_AGE.png (deflated 29%) adding: barplots/Carnosine_barplot_Genotype.png (deflated 19%) adding: barplots/C18.1.OH_barplot_Genotype.png (deflated 20%) adding: barplots/Met_barplot.map (deflated 84%) adding: barplots/C5.M.DC_barplot.map (deflated 82%) adding: barplots/Asp_barplot.map (deflated 84%) adding: barplots/alpha.AAA_barplot_AGE.png (deflated 28%) adding: barplots/alpha.AAA_barplot.map (deflated 84%) adding: barplots/PEA_barplot.map (deflated 82%) adding: barplots/PC.aa.C32.0_barplot.png (deflated 30%) adding: barplots/C16.1_barplot_AGE.png (deflated 14%) adding: barplots/C12_barplot_AGE.png (deflated 16%) adding: barplots/C3.OH_barplot_Radiation.png (deflated 15%) adding: barplots/C3.OH_barplot.png (deflated 18%) adding: barplots/PC.aa.C38.6_barplot_AGE.png (deflated 22%) adding: barplots/PC.aa.C40.3_barplot.map (deflated 83%) adding: barplots/C16.1_barplot.png (deflated 19%) adding: barplots/C8_barplot_Radiation.png (deflated 16%) adding: barplots/lysoPC.a.C18.1_barplot.map (deflated 84%) adding: barplots/C16_barplot.map (deflated 82%) adding: barplots/PC.aa.C36.5_barplot.png (deflated 37%) adding: barplots/Lys_barplot_Radiation.png (deflated 22%) adding: barplots/PC.aa.C32.0_barplot.map (deflated 84%) adding: barplots/C14_barplot.map (deflated 82%) adding: barplots/PEA_barplot_Radiation.png (deflated 24%) adding: barplots/PC.aa.C24.0_barplot_Radiation.png (deflated 29%) adding: barplots/C5.DC..C6.OH._barplot_Radiation.png (deflated 16%) adding: barplots/C5.1_barplot_Genotype.png (deflated 20%) adding: barplots/C10_barplot.map (deflated 82%) adding: barplots/Spermidine_barplot_Radiation.png (deflated 29%) adding: barplots/lysoPC.a.C17.0_barplot_AGE.png (deflated 24%) adding: barplots/C16.2_barplot.map (deflated 82%) adding: barplots/Asp_barplot.png (deflated 31%) adding: barplots/C3_barplot_Radiation.png (deflated 30%) adding: barplots/PC.aa.C36.0_barplot_Genotype.png (deflated 28%) adding: barplots/lysoPC.a.C26.1_barplot.map (deflated 82%) adding: data_all_beforeCheck.csv (deflated 78%) adding: data_beforeCheck.csv (deflated 77%) adding: phenotypes_nominal.csv (deflated 78%) adding: aux.txt (stored 0%) adding: server_log.txt (deflated 88%) adding: keggMapping.csv (deflated 84%) adding: phenotypes_beforeCheck.csv (deflated 85%) adding: refBatchBoxplot.pdf (deflated 93%) FINISHED with /home/metap2/exec/process_metaP_data.R + echo 'these are the files that are now here:' these are the files that are now here: + ls -ltra total 5832 -rw-r--r-- 1 www-data www-data 358821 Jun 16 16:12 input.tmp -rw-r--r-- 1 www-data www-data 1979 Jun 16 16:12 phenotypes.txt.tmp -rw-r--r-- 1 www-data www-data 358821 Jun 16 16:12 input -rw-r--r-- 1 www-data www-data 1979 Jun 16 16:12 phenotypes.txt -rw-r--r-- 1 www-data www-data 0 Jun 16 16:12 aux.txt -rw-r--r-- 1 www-data www-data 240 Jun 16 16:12 options -rwxr-xr-x 1 www-data www-data 603 Jun 16 16:12 metaPjob.cmd drwxrwxrwx 1908 metap2 metap2 212992 Jun 16 16:13 .. -rw-rw-r-- 1 metap2 metap2 1 Jun 16 16:13 out_params.txt -rw-rw-r-- 1 metap2 metap2 358263 Jun 16 16:13 input_4R -rw-rw-r-- 1 metap2 metap2 8271 Jun 16 16:13 keggMapping.csv -rw-rw-r-- 1 metap2 metap2 12372 Jun 16 16:13 metabNamesMapping.csv -rw-rw-r-- 1 metap2 metap2 164771 Jun 16 16:13 data_beforeCheck.csv -rw-rw-r-- 1 metap2 metap2 169018 Jun 16 16:13 data_all_beforeCheck.csv -rw-rw-r-- 1 metap2 metap2 6021 Jun 16 16:13 phenotypes_beforeCheck.csv -rw-rw-r-- 1 metap2 metap2 813 Jun 16 16:13 cv.pdf -rw-rw-r-- 1 metap2 metap2 2 Jun 16 16:13 cv.ok -rw-rw-r-- 1 metap2 metap2 289737 Jun 16 16:13 refBatchBoxplot.pdf -rw-rw-r-- 1 metap2 metap2 3006 Jun 16 16:13 pValuesForAllMetabolites__Batch.key.csv -rw-rw-r-- 1 metap2 metap2 115 Jun 16 16:13 bonferroni.csv -rw-rw-r-- 1 metap2 metap2 334947 Jun 16 16:13 batchBoxplot.pdf -rw-rw-r-- 1 metap2 metap2 555 Jun 16 16:13 rowsToMark.csv -rw-rw-r-- 1 metap2 metap2 8142 Jun 16 16:13 colsToMark.x.csv -rw-rw-r-- 1 metap2 metap2 98 Jun 16 16:13 colsToMark.csv -rw-rw-r-- 1 metap2 metap2 3985 Jun 16 16:13 phenotypes_for_QC.csv -rw-rw-r-- 1 metap2 metap2 1893 Jun 16 16:13 phenotypes.csv -rw-rw-r-- 1 metap2 metap2 95490 Jun 16 16:13 data.csv -rw-rw-r-- 1 metap2 metap2 1099 Jun 16 16:13 sample_description.csv -rw-rw-r-- 1 metap2 metap2 97391 Jun 16 16:13 data_all.csv -rw-rw-r-- 1 metap2 metap2 1893 Jun 16 16:13 phenotypes_nominal.csv -rw-rw-r-- 1 metap2 metap2 1494 Jun 16 16:13 phenotypes_numeric.csv -rw-rw-r-- 1 metap2 metap2 19190 Jun 16 16:13 summary.csv -rw-rw-r-- 1 metap2 metap2 1573869 Jun 16 16:13 histograms.pdf drwxrwxrwx 2 www-data www-data 28672 Jun 16 16:15 barplots -rw-rw-r-- 1 metap2 metap2 59349 Jun 16 16:15 .R.Rout -rw-rw-r-- 1 metap2 metap2 5475 Jun 16 16:15 processing_log.txt -rw-rw-r-- 1 metap2 metap2 1660917 Jun 16 16:15 download.zip drwxrwxrwx 3 www-data www-data 4096 Jun 16 16:15 . -rw-rw-r-- 1 metap2 metap2 32564 Jun 16 16:15 server_log.txt + set - Finishing METAP SERVER KEGG Data is provided by the Kanehisa Laboratories for academic use. Any commercial use of KEGG data requires a license agreement from Pathway Solutions Inc. The Helmholtz Zentrum München imprint applies.
This page is maintained by Gabi Kastenmüller and Werner Römisch-Margl.
Visit our NAR-web server:
|
