OPTION:FORMAT:data format: ' csv '
OPTION:MISSING:treat LOD/out of quant. data as missing: ' n '
OPTION:OUTLIER:drop outliers : ' n '
OPTION:REFERENCE:drop reference samples : ' n '
OPTION:DEL_METABS:drop metabolites with cv > 0.25 : ' n '
OPTION:RATIOS:calculate metabolite ratios : ' n '
AUX:Barplots of each metabolite class have equal y axis: TRUE
Fileformat CSV - deleted lines - win-lin
Read CSV dataset with 44 columns and 18 rows
Data format: csv
EXTRACT: 18 samples and 43 metabolites extracted
PHENOTYPES_UPLOAD:Found 18 matched lines with 2 phenotypes specified
PHENOTYPES_UPLOAD:Found ID Phase as non-data quality phenotypes
REPLICATES:No replicates
BATCHES:No batches
Wrote machted dataset to data_all_beforeCheck.csv
No replicates in data
No extreme outliers identified
No extreme outliers identified
18 samples and 43 metabolites in checked data set
Wrote machted dataset to data_all.csv
Phenotype ID is nominal
Phenotype Phase is nominal
Wrote summary.csv file
42 Distribution plots generated
Boxplots generated
Boxplots generated
Boxplots and hypothesis tests depending on ID
Boxplots generated
Boxplots and hypothesis tests depending on Phase
Boxplots generated
1 phenotypes processed for PCA