Target | cis/trans | Study | SNP | SNP location | Maj/min allele | MAF | N | βinv | seinv | Pinv | fclog | Plog | Praw |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HRG | cis | Discovery | rs2555515 | 3:186,388,028 | T/C | 0.43 | 993 | -0.453 | 0.042 | 2.8×10-25 | -1.100 | 1.2×10-24 | 5×10-26 |
HRG | cis | Replication | rs2555515 | 3:186,388,028 | A/G | 0.32 | 337 | -0.191 | 0.083 | 0.023 | -1.050 | 0.137 | 0.039 |
Target (abbrv.) | HRG |
Target (full name) | Histidine-rich glycoprotein |
Somalogic ID (Sequence ID) | SL006448 (4996-66_1) |
Entrez Gene Symbol | HRG |
UniProt ID | P04196 |
UniProt Comment |
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Reactome |
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All locus annotations are based on the sentinel SNP (rs2555515) and 3 proxy variant(s) that is/are in linkage disequilibrium r2 ≥ 0.8. Linkage disequilibrium is based on data from the 1000 Genomes Project, phase 3 version 5, European population and was retrieved using SNiPA's Block Annotation feature.
Download the detailed results of SNiPA's block annotation (PDF)
Genes hit or close-by |
|
Trait | P | Study | Source |
---|---|---|---|
Activated partial thromboplastin time | 5.4×10-75 | 22703881 (PMID) | GRASP2 nonQTL |
cg02097420 (chr3:186383850) | 1.1×10-7 | 10.1101/033084 (DOI) | BIOS QTL cis-meQTLs |
Serum ratio of (gamma-glutamylisoleucine*)/(glycerate) | 1.8×10-5 | 21886157 (PMID) | GRASP2 metabQTL |
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