Target | cis/trans | Study | SNP | SNP location | Maj/min allele | MAF | N | βinv | seinv | Pinv | fclog | Plog | Praw |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
DERM | cis | Discovery | rs494189 | 1:168,707,757 | G/A | 0.25 | 997 | -0.355 | 0.045 | 1.1×10-14 | -1.070 | 1.9×10-13 | 2×10-11 |
DERM | cis | Replication | rs628718 | 1:168,697,942 | A/G | 0.41 | 337 | -0.336 | 0.067 | 7.3×10-7 | -1.090 | 1.9×10-6 | 3.7×10-5 |
Target (abbrv.) | DERM |
Target (full name) | Dermatopontin |
Somalogic ID (Sequence ID) | SL008178 (4979-34_2) |
Entrez Gene Symbol | DPT |
UniProt ID | Q07507 |
UniProt Comment |
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All locus annotations are based on the sentinel SNP (rs494189) and 15 proxy variant(s) that is/are in linkage disequilibrium r2 ≥ 0.8. Linkage disequilibrium is based on data from the 1000 Genomes Project, phase 3 version 5, European population and was retrieved using SNiPA's Block Annotation feature.
Download the detailed results of SNiPA's block annotation (PDF)
Genes hit or close-by |
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Potentially regulated genes |
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eQTL genes |
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Trait | P | Study | Source |
---|---|---|---|
Gene expression of DPT in normal prepouch ileum | 1.1×10-4 | 23474282 (PMID) | GRASP2 eQTL |
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